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Software
Top > Biology > Biochemistry and Molecular Biology > Biomolecules > Software
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Resource for visualization and analysis of 3D-biopolymer structures; proteins, nucleic acids, carbohydrates, and small molecule ligands. Combines experimental and computer generated models, maintained in Germany.
Details Hits: 1 Votes: 0 Ratings: 
Reviews: 
Google PR: 22. Jay Ponder Lab
Graphical user interface to suites of molecular modeling tools, providing an integrated environment for engineering applications. Contacts for the group at Washington University School of Medicine in Saint Louis, Missouri.
Details Hits: 0 Votes: 0 Ratings: Reviews: Google PR: 23. RAMP
Public domain suite of programs to aid in the modeling of protein three-dimensional structures. Tested on Linux and Unix.
Details Hits: 0 Votes: 0 Ratings: Reviews: Google PR: 24. WhatIf
Protein structure analysis software for Linux, SGI/IRIX, Windows NT. Performs mutant prediction, structure verification, homology modeling and molecular visualization. Links to the documentation in HTML. Commercial software.
Details Hits: 1 Votes: 0 Ratings: Reviews: Google PR: PSdb uses primary data, to relate secondary and tertiary information, for solvent accessibility, internal relative distances, and ligand interactions. Maintained at the Mellon Institute, Pittsburgh, Pennsylvania.
Details Hits: 0 Votes: 0 Ratings: Reviews: Google PR: Modeling tool for theoretical studies, employing molecular mechanics approach in combination with Monte Carlo energy minimization algorithm. Downloads on secure server, and contacts in Flamborough, Ontario.
Details Hits: 1 Votes: 0 Ratings: Reviews: Google PR: 27. Genoscience
Genmol is a 3D molecular modeling software for measuring resistance/affinity between a ligand and a target, used for disease management and drug discovery. Details of company in Marseille, France.
Details Hits: 0 Votes: 0 Ratings: Reviews: Google PR: 28. Ghemical
An easy-to-use molecular editor and modeling package with all-atoms molecular mechanics, reduced protein models and links to many common chemistry programs. Ghemical is released under the GNU GPL and includes source code.
Details Hits: 1 Votes: 0 Ratings: Reviews: Google PR: Introduction to a quick, simple, and free way to model molecules.
Details Hits: 1 Votes: 0 Ratings: Reviews: Google PR: 30. CHARMM
A program for macromolecular dynamics and mechanics. It performs standard molecular dynamics in many different ensembles (e.g., NVE, NVT, NPT) using state-of-the-art algorithms for timestepping, long range force calculation and periodic images.
Details Hits: 0 Votes: 0 Ratings: Reviews: Google PR: Pages: [< Previous] 1 2
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