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Commercial Windows natural language processing software for the automated extraction of biological data from scientific literature.
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Commercial Windows software for analyzing biochip image data.
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Java program for searching Tandem Repeats (TR) in a DNA sequence. It shows the results also in a graphical format.
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Commercial software for DNA and Protein sequence analysis and manipulation. Available for Windows and Mac OS X.
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XP.
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projects.
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An open, extensible web-based collaborative platform for microarray gene expression, sequence and PPI data analysis, exposing distinct chainable components for clustering, pattern discovery, statistics, machine-learning algorithms and visualization.
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Locates and displays tandem repeats in DNA sequences.
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Free software for constructing global alignments of multiple rearranged genomes. The visualization environment displays sequence similarity profiles and annotated sequence features.
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Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
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GoCore is an free Excel based tool for protein sequence alignment, comparisons and functional predictions in a simple, visually appealing, manner.
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Knoppix based bioinformatics software tools. Bootable from CD.
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Commercial Mac OS X sequence analysis and structure visualization software.
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Open source Java software for checking and conversion of MicroArray Array Design data file (ADF -Array Design File- MAGE-ML).
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Free Windows biological sequence alignment editor.
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3D visualisation platform for Comparative Genomics visualisation.
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Commercial Windows software for batch handling and analysis of nucleotide and protein sequences.
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Object-oriented regulation network simulator written in Java. Includes downloadable software and documentation. The site is in French and English.
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An integrated portal for common web-based bioinformatics services. Built in Javascript as a standalone browser application.
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Offers a range of free software tools for annotating an entire genome, assembling sequences, gap closing and analysis of microarrays.
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