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PEDANT
38302
PEDANT
http://pedant.gsf.de/
Completely automatic and exhaustive analysis of protein sequence sets - from individual sequences to complete genomes
Biology > Bioinformatics > Online Services
ibi mips bioinformatics
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services
1. PEDANT
Completely automatic and exhaustive analysis of protein sequence sets - from individual sequences to complete genomes
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2. PubCrawler
An online service for periodically performing predefined searches at NCBI, reporting new results by email or on the web.
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3. WebACT
A database of sequence comparisons between all publicly available prokaryotic genome sequences, allowing the on-line visualisation of comparisons between up to five genomic sequences, using the Artemis Comparison Tool. User can perform their comparisons on their own data.
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4. Carnac
A free software tool for analysing the hypothetical secondary structure of a family of homologous RNA.
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A Suite of Online tools for analysis of DNA/RNA, Proteins, and Arrays.
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Gene sequence extraction of regions around the 5'-end (promoter) and/or the translation initiation site (TIS) of a gene.
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7. ProPred-I
An online service for predicting MHC binding regions in antigens. It also offers the proteasomal and immunoproteasomal filters to improve the applicability of results.
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8. Scansite
Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.
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9. Bioverse
Provides a framework for exploring the relationships among the molecular, genomic, proteomic, systems, and organismal worlds.
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10. Content
Several genomics and proteomics tools, including multiple alignments, gene expression analysis, tandem repeat and motif discovery.
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