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Bioverse
38316
Bioverse
http://bioverse.compbio.washington.edu
Provides a framework for exploring the relationships among the molecular, genomic, proteomic, systems, and organismal worlds.
Biology > Bioinformatics > Online Services
Jan 6, 2008
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BIND is a database designed to store full descriptions of interactions, molecular complexes and pathways.
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2. WebACT
A database of sequence comparisons between all publicly available prokaryotic genome sequences, allowing the on-line visualisation of comparisons between up to five genomic sequences, using the Artemis Comparison Tool. User can perform their comparisons on their own data.
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Normalization tests for differentially expressed genes, clustering, bootstrapping, leave-one-out validation, cross-fold validation.
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MINT is a database designed to store functional interactions between biological molecules (proteins, RNA, DNA).
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5. ParAlign
Service using the ParAlign algorithm to compare genetic sequences. Apparently it is as fast as BLAST and as sensitive as Smith-Waterman.
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A meta-server and decision support system for Protein Comparison, Knowledge, Similarity and Information, using protein contact maps.
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Numerous computational tools and resources to unite advances in biology with those in computers, informatics, and networking for the genomic and genetic analysis fields of BioInformatics; division of the Computational Bioscience and Engineering Lab at the Center for Information Technology.
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8. Bioverse
Provides a framework for exploring the relationships among the molecular, genomic, proteomic, systems, and organismal worlds.
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Very helpful software for locating and displaying transcription factor binding sites within DNA sequences - from the Univ. of Penn.
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10. ProteinLounge
Bioinformatics portal which integrates protein information and many databases and research tools useful for researchers and students. Subscription based service.
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