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ProCKSI: Similarity Comparison of Proteins using Contact Maps
38347
ProCKSI: Similarity Comparison of Proteins using Contact Maps
http://www.procksi.net
A meta-server and decision support system for Protein Comparison, Knowledge, Similarity and Information, using protein contact maps.
Biology > Bioinformatics > Online Services
meta-server decision support consensus similarity
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services
1. Content
Several genomics and proteomics tools, including multiple alignments, gene expression analysis, tandem repeat and motif discovery.
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2. PubCrawler
An online service for periodically performing predefined searches at NCBI, reporting new results by email or on the web.
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Numerous computational tools and resources to unite advances in biology with those in computers, informatics, and networking for the genomic and genetic analysis fields of BioInformatics; division of the Computational Bioscience and Engineering Lab at the Center for Information Technology.
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Free service for retrieving all synonyms for a given gene or protein name.
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User guides and worked examples for software applications in structural and molecular biology - from Yale Univ.
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GeneBio provides proteomics software tools and databases including SWISS-PROT, PROSITE, SWISS-2DPAGE and Melanie. We also offer a secure version of ExPASy molecular biology web server.
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Information methodologies, tools, and technologies relating to the study of gene expression and signal transduction from the Institute for Transcriptional Informatics.
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8. Carnac
A free software tool for analysing the hypothetical secondary structure of a family of homologous RNA.
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9. QGRS Mapper
Generates information on composition and distribution of putative Quadruplex forming G-Rich Sequences (QGRS) in nucleotide sequences and NCBI genes.
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Transterm - an interactive database of mRNA regions and motifs from all species and genomes. Users can browse the pre-computed data tables, search the sequence databases or search their own sequences.
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