+ Main Category
Biology: 18072
Agriculture: 7697
Horticulture: 3991
Forestry: 845
Geography: 5128
Environment: 5567
Research: 2417
Society: 448
+ Tell a Friend
Fill out the information below to email a friend a brief note about 'TropHort: Biology, Agriculture and Geography'
+ Top 10
+ Directory Statistics
Links: 41732
Categories: 7194
Registered Users: 751
Mailing List Subscribers: 153
+ Pagerank Statistics
+ Join Mailing List
Joining mailing list will entitle you
to receive occasional emails informing you of news and
updates to the site and any special offers that may be
of interest to you.
Meta-MEME
38374
Meta-MEME
http://metameme.sdsc.edu/
Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - from the Univ. of California-San Diego.
Biology > Bioinformatics > Online Services > Homology Detection
Jan 6, 2008
Write a Review
Add to My Favorite
Refer it to Friend
Report Broken Link
Other links at Biology > Bioinformatics > Online Services > Homology Detection
Sensitive, selective, and rapid sequence database searching with gapped alignments - from Washington Univ.-St.Louis.
Category:
2. GeneMatcher
Access to Smith-Waterman-based FDF sequence comparison program, with excellent explanation of when to use it vs. BLAST - from the Univ. of Lausanne, FR.
Category:
This is a server for structural superfamily assignments to protein sequences using Hidden Markov Models. The services included are: -homology searching -alignments -genome assignments
Category:
Detection and assessment of similarity between distantly related sequences by means of a variety of remotely-executable software - from the Swiss Inst. for Experimental Cancer Research.
Category:
Open source tool for identifying serial repeats (tandem repeats) in DNA sequences.
Category:
6. ESPript
Formating of multiple sequence alignments to a color postscript file. Can include graphical features by using PDB entry.
Category:
7. Meta-MEME
Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - from the Univ. of California-San Diego.
Category:
Implementation of hidden Markov models for sequence analysis. Free UNIX software for nonprofit groups, and sequences can be submitted online.
Category:
Commercial general homology search software significantly faster than BLAST.
Category:
Utility for online manipulation of Blast results. Results organized in a table format.
Category:
