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Betapred
38412
Betapred
http://imtech.res.in/raghava/betatpred
Prediction of beta turns and their types using statistical algorithms. 5 different methods including Chou-Fasman, Thornton's PRs, Gorbturn, and a consensus of all methods.
Biology > Bioinformatics > Online Services > Protein Analysis
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services > Protein Analysis
Search engine for visualizing 3-D biomolecular models. From the Center for Molecular Modeling, NIH, Maryland.
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SPORes is a website for protein structure prediction using the web browser as an interface to software that runs of web servers or other resources available over the world wide web.
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3. Wurst
A protein threading server using sequence profiles combined with a protein sequence to structure compatibility function based on Bayesian statistics.
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Accepts a single query protein sequence and returns the most probable Gene Ontology functional annotations in each of the three ontologies.
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Collection of human (swall) proteins, crossreferences to major prediction servers. Supported predictions from: smart, string, blast, swall, mapview, sosui, ipsort and ncbi conserved domains.
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6. MultiProt
Service for detecting the multiple structural alignments of proteins. Uses the common geometrical cores between the input molecules. Does not require that all the input molecules participate in the alignment.
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7. ConSurf
Identifies functionally important regions on the surface of a protein or domain, of known three-dimensional (3D) structure using the phylogenetic relations between close sequence homologues.
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User-friendly interface allowing analysis of several proteins at once, including superimposition to deduce structural alignments, and compare active sites. From GlaxoWellcome Experimental Research, Geneva, Switzerland.
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Calculated using the FASTA amino acid sequence and pKa values for. Allows consideration of post-translational modifications.
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The SWISS-PROT database contains high-quality annotation, is non-redundant and cross-referenced to many other databases. SWISS-PROT is accompanied by TrEMBL, a computer-annotated supplement, which contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database, which are not yet integrated into SWISS-PROT.
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