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Dali server
38423
Dali server
http://www.ebi.ac.uk/dali/
The Dali server is a network service for comparing protein structures in 3D.
Biology > Bioinformatics > Online Services > Protein Analysis
3d protein structures multiple alignment fold classification bioinformatics ebi dali embl databases
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services > Protein Analysis
1. Jpred
Secondary protein structure prediction from amino acid sequence; based on a consensus from several methods including DSC, PHD, NNSSP, PREDATOR, ZPRED, and MULPRED.
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2. DisEMBL
Computational tool for sequence based prediction of intrinsic protein disorder and unstructured regions within a protein.
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3. ConSurf
Identifies functionally important regions on the surface of a protein or domain, of known three-dimensional (3D) structure using the phylogenetic relations between close sequence homologues.
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4. MultiProt
Service for detecting the multiple structural alignments of proteins. Uses the common geometrical cores between the input molecules. Does not require that all the input molecules participate in the alignment.
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Online software for protein analysis from the Swiss Institute of Bioinformatics (SIB).
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SPORes is a website for protein structure prediction using the web browser as an interface to software that runs of web servers or other resources available over the world wide web.
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Accepts a single query protein sequence and returns the most probable Gene Ontology functional annotations in each of the three ontologies.
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Phyre is a free for academics service for predicting the 3-dimensional structure of a protein amino acid sequence.
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Includes WebOligoMelt (Annealing temperature of oligonucleotides), Virtual Ribosome (translate nucleotide sequences into peptides), and SeqScanGraph (graph melting temperature along nucleotide chain).
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Finds Nuclease-Associated Modular DNA-binding Domains (NUMODs) in protein sequences
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