+ Main Category
Biology: 18072
Agriculture: 7697
Horticulture: 3991
Forestry: 845
Geography: 5128
Environment: 5567
Research: 2417
Society: 448
+ Tell a Friend
Fill out the information below to email a friend a brief note about 'TropHort: Biology, Agriculture and Geography'
+ Top 10
+ Directory Statistics
Links: 41732
Categories: 7194
Registered Users: 751
Mailing List Subscribers: 153
+ Pagerank Statistics
+ Join Mailing List
Joining mailing list will entitle you
to receive occasional emails informing you of news and
updates to the site and any special offers that may be
of interest to you.
ESyPred3D
38426
ESyPred3D
http://www.fundp.ac.be/urbm/bioinfo/esypred/
ESyPred3D is an automated homology modeling program getting benefit of the increased alignment performances of a new alignment strategy using neural networks. The final three dimensional structure is built using the modeling package MODELLER.
Biology > Bioinformatics > Online Services > Protein Analysis
Jan 6, 2008
Write a Review
Add to My Favorite
Refer it to Friend
Report Broken Link
Other links at Biology > Bioinformatics > Online Services > Protein Analysis
1. COLORADO3D
Service to aid visualisation of potential errors in protein structures. Free for academic users.
Category:
2. DisEMBL
Computational tool for sequence based prediction of intrinsic protein disorder and unstructured regions within a protein.
Category:
3. MODBASE
A database of annotated comparative protein structure models. The database includes fold assignments and alignments as well as information about putative ligand binding sites, SNP annotation, and protein-protein interactions.
Category:
In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database --- a comprehensive, annotated, and non-redundant set of protein sequence databases in which entries are classified into family groups and alignments of each group are available.
Category:
5. ESyPred3D
ESyPred3D is an automated homology modeling program getting benefit of the increased alignment performances of a new alignment strategy using neural networks. The final three dimensional structure is built using the modeling package MODELLER.
Category:
analysis programs - from GBF, Braunschweig, Germany.
Category:
Online backtranslation tool for translating a protein sequence into a DNA sequence. The codon usage can be downloaded from a database and adjusted manually for each amino acid, if required. Java applet.
Category:
The SWISS-PROT database contains high-quality annotation, is non-redundant and cross-referenced to many other databases. SWISS-PROT is accompanied by TrEMBL, a computer-annotated supplement, which contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database, which are not yet integrated into SWISS-PROT.
Category:
9. ConSurf
Identifies functionally important regions on the surface of a protein or domain, of known three-dimensional (3D) structure using the phylogenetic relations between close sequence homologues.
Category:
Powerful, state-of-the-art, 2-D analysis software package with user-friendly interface from the Swiss Institute of Bioinformatics.
Category:
