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TRANSFAC-The Transcription Factor Database
38434
TRANSFAC-The Transcription Factor Database
http://www.gene-regulation.com/pub/databases.html#transfac
analysis programs - from GBF, Braunschweig, Germany.
Biology > Bioinformatics > Online Services > Protein Analysis
genregulation gene regulation gene-regulation biobase datenbank datenbanken database databases biotechnologie biotechnology transfac pathodb
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services > Protein Analysis
analysis programs - from GBF, Braunschweig, Germany.
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In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database --- a comprehensive, annotated, and non-redundant set of protein sequence databases in which entries are classified into family groups and alignments of each group are available.
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3. Betapred
Prediction of beta turns and their types using statistical algorithms. 5 different methods including Chou-Fasman, Thornton's PRs, Gorbturn, and a consensus of all methods.
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Most widely used server for analysing protein sequences, searching protein databases, and predicting protein structure - from Columbia Univ.
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Calculated using the FASTA amino acid sequence and pKa values for. Allows consideration of post-translational modifications.
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Search engine for visualizing 3-D biomolecular models. From the Center for Molecular Modeling, NIH, Maryland.
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7. MSDmotif
Service for protein sequence motifs detection. Search based on the small 3D motifs defined by J.Milner-White.
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Powerful, state-of-the-art, 2-D analysis software package with user-friendly interface from the Swiss Institute of Bioinformatics.
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Online backtranslation tool for translating a protein sequence into a DNA sequence. The codon usage can be downloaded from a database and adjusted manually for each amino acid, if required. Java applet.
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10. Swiss-Model
Automated comparative protein modelling server to make protein modelling accessible to biochemists and molecular biologists worldwide - from GlaxoWellcome Experimental Research, Geneva, Switzerland.
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