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DisEMBL
38437
DisEMBL
http://dis.embl.de
Computational tool for sequence based prediction of intrinsic protein disorder and unstructured regions within a protein.
Biology > Bioinformatics > Online Services > Protein Analysis
protein disorder domain boundaries predictor predictionloops unstructured unfolded intrinsic intrinsically genomics proteomics globularity non-globular x-raynmr polypeptides biopolymers iup iups idp idps elm elms crystallisation co
Jan 6, 2008
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Other links at Biology > Bioinformatics > Online Services > Protein Analysis
1. COLORADO3D
Service to aid visualisation of potential errors in protein structures. Free for academic users.
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Search engine for visualizing 3-D biomolecular models. From the Center for Molecular Modeling, NIH, Maryland.
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Calculated using the FASTA amino acid sequence and pKa values for. Allows consideration of post-translational modifications.
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Includes WebOligoMelt (Annealing temperature of oligonucleotides), Virtual Ribosome (translate nucleotide sequences into peptides), and SeqScanGraph (graph melting temperature along nucleotide chain).
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5. 3D-JIGSAW
Automated comparative (homology) protein modelling, including an interactive mode which highlights known domains and allows users to select and align templates.
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6. ProtFun
Ab initio predictions of protein function from protein sequence. The method works by integrating various predicted post-translational and localizational aspects of the proteins submitted.
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Phyre is a free for academics service for predicting the 3-dimensional structure of a protein amino acid sequence.
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Most widely used server for analysing protein sequences, searching protein databases, and predicting protein structure - from Columbia Univ.
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9. ESyPred3D
ESyPred3D is an automated homology modeling program getting benefit of the increased alignment performances of a new alignment strategy using neural networks. The final three dimensional structure is built using the modeling package MODELLER.
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10. Dali server
The Dali server is a network service for comparing protein structures in 3D.
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