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HMMER

38520 HMMER http://hmmer.wustl.edu/ Profiles protein sequence data using hidden Markov models of a statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis. Biology > Bioinformatics > Software Jan 6, 2008  

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Other links at Biology > Bioinformatics > Software

Locates and displays tandem repeats in DNA sequences.
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Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
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