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Sfold

38532 Sfold http://sfold.wadsworth.org/index.pl Predicts probable RNA secondary structures, assesses target accessibility, and provides tools for the rational design of RNA-targeting nucleic acids. The web server version is free for academic use. Biology > Bioinformatics > Software sfold   wadsworth   center   nys   department   of   health   rna   structure   folding   antisense   ribozyme   soligo   sribo   srna   sirna   interference   rnai   algorithm   prediction   sampling   biology   chemistry   bioinformatics   statistical   nucleic   acid Jan 6, 2008  

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Other links at Biology > Bioinformatics > Software

Commercial Windows natural language processing software for the automated extraction of biological data from scientific literature.
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Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
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Open source Java software for checking and conversion of MicroArray Array Design data file (ADF -Array Design File- MAGE-ML).
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A widely-used program for base calling DNA sequencing trace files. Source code available and free for non-commecial users.
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XP.
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A tool designed for efficient knowledge and data capture from electronic resources for sharing, mining and presentation purposes.
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The Washington University improved version of BLAST. Free for academic users.
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Computes, for a nucleic acid duplex, the enthalpy, the entropy and the melting temperature of the helix-coil transitions.
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