+ Main Category
Biology: 18066
Agriculture: 7684
Horticulture: 3982
Forestry: 843
Geography: 5126
Environment: 5562
Research: 2212
Society: 445
+ Tell a Friend
Fill out the information below to email a friend a brief note about 'TropHort: Biology, Agriculture and Geography'
+ Top 10
+ Directory Statistics
Links: 41700
Categories: 7193
Registered Users: 599
Mailing List Subscribers: 115
+ Pagerank Statistics
+ Join Mailing List
Joining mailing list will entitle you
to receive occasional emails informing you of news and
updates to the site and any special offers that may be
of interest to you.
STRAP
38539
STRAP
http://www.charite.de/bioinf/strap
Software supports the analysis of hundreds of proteins and integrates aa sequence, secondary structure, 3D-structure and genomic- and mRNA-sequence, and residue annotation.
Biology > Bioinformatics > Software
multiple sequence alignments windows unix linux mac
Jan 6, 2008
Write a Review
Add to My Favorite
Refer it to Friend
Report Broken Link
Other links at Biology > Bioinformatics > Software
Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
Category:
2. JSTRING
Java program for searching Tandem Repeats (TR) in a DNA sequence. It shows the results also in a graphical format.
Category:
3. Genespotter
Commercial Windows software for analyzing biochip image data.
Category:
A freeware Java application that does many standard types of DNA and protein sequence analysis tasks.
Category:
5. ADF MAGE-ML
Open source Java software for checking and conversion of MicroArray Array Design data file (ADF -Array Design File- MAGE-ML).
Category:
6. WU-BLAST
The Washington University improved version of BLAST. Free for academic users.
Category:
The MaGe system offers a set of graphical interfaces which allow biologist to perform relevant expert annotation of microbial genomes.
Category:
8. PhyloSort
A Java tool to sort phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units.
Category:
9. HMMER
Profiles protein sequence data using hidden Markov models of a statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis.
Category:
10. DNA Counter
Small free Windows program to calculate nucleotides frequencies in DNA sequences.
Category:
