+ Main Category
Biology: 18072
Agriculture: 7697
Horticulture: 3991
Forestry: 845
Geography: 5128
Environment: 5567
Research: 2417
Society: 448
+ Tell a Friend
Fill out the information below to email a friend a brief note about 'TropHort: Biology, Agriculture and Geography'
+ Top 10
+ Directory Statistics
Links: 41732
Categories: 7194
Registered Users: 751
Mailing List Subscribers: 153
+ Pagerank Statistics
+ Join Mailing List
Joining mailing list will entitle you
to receive occasional emails informing you of news and
updates to the site and any special offers that may be
of interest to you.
Mauve
38548
Mauve
http://gel.ahabs.wisc.edu/mauve/
Free software for constructing global alignments of multiple rearranged genomes. The visualization environment displays sequence similarity profiles and annotated sequence features.
Biology > Bioinformatics > Software
genome evolution alignment plant pathogens gamma-proteobacteria enteric bacteria erwinia caratovora chrysanthemi comparative genomics
Jan 6, 2008
Write a Review
Add to My Favorite
Refer it to Friend
Report Broken Link
Other links at Biology > Bioinformatics > Software
1. HMMER
Profiles protein sequence data using hidden Markov models of a statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis.
Category:
2. WU-BLAST
The Washington University improved version of BLAST. Free for academic users.
Category:
3. APBioKnoppix
Knoppix based bioinformatics software tools. Bootable from CD.
Category:
5. Friend
An integrated multiple structure visualization and multiple sequence alignment application. Avaliable for Windows, Linux
Category:
6. DNAMAN
Commercial software for DNA and Protein sequence analysis and manipulation. Available for Windows and Mac OS X.
Category:
7. JSTRING
Java program for searching Tandem Repeats (TR) in a DNA sequence. It shows the results also in a graphical format.
Category:
8. MedScan
Commercial Windows natural language processing software for the automated extraction of biological data from scientific literature.
Category:
9. Sfold
Predicts probable RNA secondary structures, assesses target accessibility, and provides tools for the rational design of RNA-targeting nucleic acids. The web server version is free for academic use.
Category:
10. limmaGUI
A graphical user interface for linear modelling of cDNA and oligonucleotide microarray data to identify differentially expressed genes.
Category:
