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INCA - INteractive Codon Analysis
38549
INCA - INteractive Codon Analysis
http://www.bioinfo-hr.org/inca
Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
Biology > Bioinformatics > Software
Jan 6, 2008
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Other links at Biology > Bioinformatics > Software
1. biOpen
Commercial Mac OS X sequence analysis and structure visualization software.
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2. DNAMAN
Commercial software for DNA and Protein sequence analysis and manipulation. Available for Windows and Mac OS X.
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4. Darwin
An interactive tool for peptide and nucleotide sequence analysis.
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5. BioEdit
6. DNA Counter
Small free Windows program to calculate nucleotides frequencies in DNA sequences.
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7. STRING
Search for Tandem Repeats IN Genomes. Includes C source code and examples.
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8. Mauve
Free software for constructing global alignments of multiple rearranged genomes. The visualization environment displays sequence similarity profiles and annotated sequence features.
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9. STRAP
Software supports the analysis of hundreds of proteins and integrates aa sequence, secondary structure, 3D-structure and genomic- and mRNA-sequence, and residue annotation.
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10. FASTA Convertor
Free Windows tool for merging multiple FASTA files into a single FASTA file.
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