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BioQuery

38579 BioQuery http://www.bioquery.org/ Tools that searches multiple biomedical databases from your desktop. Biology > Bioinformatics > Software > Software Development bioinformatics   biomedical   databases   database   search   genbank   swiss-prot   nucleotide   protein   taxonomy   genome   popset   structure   pubmed   medline   omim   online   mendelian   inheritance   in   man   ncbi   national   center   for   biotechnology   information Jan 6, 2008  

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Other links at Biology > Bioinformatics > Software > Software Development

A tool to analyze a set of ESTs. Cleans, clusters and annotates the sequences and prepares a web site to browse the results in a complete automatic way.
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Extendable parallel system for automatic genome analysis. Software for analysing all potential genes in a defined genome region. Given two marker names, can output reports of genomic features between them. Features for converting between naming systems, sequence retrieval, E-PCR, gene prediction, similarity search, protein pattern search, and report formatting. Written in Java.
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Analytical tools and SQL scripts that solve common problems in drug discovery.
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Simple but powerful data exchange language, suitable for serializing biological data objects.
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Software development for structural bioinformatics. Runs on Unix, Windows and MacOSX.
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BioRuby project aims to implement an integrated environment for Bioinformatics with Ruby language.
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A hierarchical database system for displaying genomic data (originally C. elegans), suitable also for displaying other scientific data.
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BioLisp.org is a public resource supporting scientists who use Lisp to develop intelligent applications in the biological sciences. We collect and disseminate Lisp biocomputing code, and gather pointers to Lisp and other Intelligent BioComputing methods.
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Predict metabolic pathways from genomes and graphically depict pathways. Visualize gene expression data on a metabolic pathway map. Generate a metabolic wall chart. Includes a genome browser and support for transcriptional regulatory networks.
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10. NeoBio
An open source library of Java bioinformatics algorithms. The current version consists mainly of sequence alignment algorithms such as Needleman- Wunsch and Smith-Waterman.
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