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EST2uni
38590
EST2uni
http://www.melogen.upv.es/genomica/web_estpipe/index.php
A tool to analyze a set of ESTs. Cleans, clusters and annotates the sequences and prepares a web site to browse the results in a complete automatic way.
Biology > Bioinformatics > Software > Software Development
Jan 6, 2008
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Other links at Biology > Bioinformatics > Software > Software Development
CLEML open format for representing and exchanging 13C metabolic flux analysis models.
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2. BioPython
The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.
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Integrates multiple public bioinformatics databases into a single relational database system within a common bioinformatics schema.
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A framework to perform electrophysiological simulations. Useful for simulations of action potentials, individual ionic currents, and changes in ionic concentrations.
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A set of software tools that filter, format, and merge data in tabular or common biological formats. Organized as a classified collection of Perl one-liners.
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6. MolTalk
Software development for structural bioinformatics. Runs on Unix, Windows and MacOSX.
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7. BioJava.org
The BioJava Project is an open-source project dedicated to providing Java tools for processing biological data.
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XEMBL provides access to the EMBL/GenBank/DDBJ Nucleotide Sequence Database, providing output in various XML standards.
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The Bioconductor project produces an open source software framework that will assist biologists and statisticians working in bioinformatics, with primary emphasis on inference using DNA microarrays, built mostly using R.
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10. PISE
Given an abstract definition of a program's parameters, PISE can generate whatever style of interface from the configuration module.
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