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Gene Expression Open Source System
59586
Gene Expression Open Source System
https://biostat.virginia.edu/geoss/site/
Open source database and analysis package used to archive and analyze expression data from gene chip experiments. Includes microarray center workflow management, and researcher tools to analyze final data.
Biology > Genetics > Software
Jan 6, 2008
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Other links at Biology > Genetics > Software
Software to automatically detect mutations from DNA sequence data, including homozygous, heterozygous, insertion and deletion.
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Database system to build and publish synonymised checklists of species. Species descriptions include pre-established fields and detailed descriptions employing any number of user-defined fields.
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Genetic networks controlling development in Sea Urchin represented as Java applets. Formal scheme. Molecular interactions modelled as Petri Net.
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Offers links and other resources for genetic analysis software from the Rockefeller University.
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Software and reagent for improving the quality and read length of DNA sequence traces collected on the ABI 3730 DNA sequencer.
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ASSP predicts putative alternative exon isoform, cryptic, and constitutive splice sites of internal (coding) exons.
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Open source database and analysis package used to archive and analyze expression data from gene chip experiments. Includes microarray center workflow management, and researcher tools to analyze final data.
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8. STRand
Open-source Windows program to automate or speed up the analysis of DNA fragment length polymorphism samples run on ABI3730, 3700 and 377 sequencers. Instructions for use and program download available.
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The Sequence Manipulation Suite is a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by molecular biologists, for teaching purposes, and for program and algorithm testing.
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10. Synopsis
Commercial Windows software for visualization and annotation of genomic data.
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