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Web Links [Tag : bioinformatics]


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Commercial general homology search software significantly faster than BLAST.
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102. REBASE
The restriction enzyme database, from New England Biolabs.
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The SWISS-PROT database contains high-quality annotation, is non-redundant and cross-referenced to many other databases. SWISS-PROT is accompanied by TrEMBL, a computer-annotated supplement, which contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database, which are not yet integrated into SWISS-PROT.
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An experimental bioinformatics server. Classifies protein sequences as homodimers or non-homodimers. Applications: metabolic reconstruction, protein structure and function assignment, and drug-design.
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Bioinformatics research group offering organism specific information (Yeast, Cress) as well as search tools for public databases.
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Most widely used server for analysing protein sequences, searching protein databases, and predicting protein structure - from Columbia Univ.
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3D protein structure prediction from amino acid sequence. Includes MEMSAT for transmembrane topology prediction, GenTHREADER and mGenTHREADER for fold recognition.
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Online software for protein analysis from the Swiss Institute of Bioinformatics (SIB).
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Provides protein structure information such as structural alignment, residue contact, protein-protein interfaces, contact maps and general information extraction.
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The Dali server is a network service for comparing protein structures in 3D.
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Service to aid visualisation of potential errors in protein structures. Free for academic users.
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Online backtranslation tool for translating a protein sequence into a DNA sequence. The codon usage can be downloaded from a database and adjusted manually for each amino acid, if required. Java applet.
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Computational Biology and Natural Computing.
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The mission of this organization is to address fundamental questions in the life sciences and provide information and analytical resources to the wider biology research community.
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Main web site for the UCLA Bioinformatics program.
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Linnaeus Centre for Bioinformatics, Uppsala, Sweden, research areas include Algorithms and Databases, Genome Studies, Expression and Function, and Structure and Design. Runs courses and seminars in Bioinformatics.
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Research in the field of bioinformatics, using computation to analyze genome sequences, expression datasets and macromolecular structures.
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The IBIVU hosts biostatistics, computer science, genomics, molecular cell physiology and core bioinformatics groups for research and education. Teaching includes an international 2-year bioinformatics master course.
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Home page for Georgetown University bioinformatics group.
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Bioinformatics group at the Indiana University School of Informatics, IUPUI campus.
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