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Web Links [Tag : bioinformatics]


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Bioinformatics and computational biology research.
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Based in the Queen's Medical Research Institute (QMRI) at the University of Edinburgh in Scotland. Bioinformatics support and research within the cardiovascular and inflammation medical research centres.
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Provide the infrastructure for research initiatives in Immunoinformatics, Proteomics, Genomics and Glycomics.
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Provides genome browser, gene sorter, blat search function, and publications.
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Offers database lists, laws, and tool download, from Roslin Institute.
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CUBIC is one of six bioinformatics centers which were merged to form the Network of Bioinformatics Competence Centers (NBCC). The center is designed as a research institution focused on the analysis of molecular networks in organisms.
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BLAST (Basic Local Alignment Search Tool) is a set of similarity search programs designed to explore all of the available sequence databases regardless of whether the query is protein or DNA.
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128. Sfold
Predicts probable RNA secondary structures, assesses target accessibility, and provides tools for the rational design of RNA-targeting nucleic acids. The web server version is free for academic use.
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129. MedScan
Commercial Windows natural language processing software for the automated extraction of biological data from scientific literature.
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Open source Java software for checking and conversion of MicroArray Array Design data file (ADF -Array Design File- MAGE-ML).
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Commercial Windows software for batch handling and analysis of nucleotide and protein sequences.
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132. SeWeR
An integrated portal for common web-based bioinformatics services. Built in Javascript as a standalone browser application.
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Commercial graphical software for Blast searches.
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The Bioperl Project is an international association of developers of open source Perl tools for bioinformatics, genomics and life science research. The Bioperl server provides an online resource for modules, scripts, and web links.
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Tools that searches multiple biomedical databases from your desktop.
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136. MolTalk
Software development for structural bioinformatics. Runs on Unix, Windows and MacOSX.
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137. BioPHP
An open source project to develop PHP code and scripts for biocomputing. A wiki-like service allows collaboration between developers.
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138. NeoBio
An open source library of Java bioinformatics algorithms. The current version consists mainly of sequence alignment algorithms such as Needleman- Wunsch and Smith-Waterman.
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XEMBL provides access to the EMBL/GenBank/DDBJ Nucleotide Sequence Database, providing output in various XML standards.
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CLEML open format for representing and exchanging 13C metabolic flux analysis models.
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